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Analytical Jacobian

James Sutherland requested to merge analytical-jacobian into master

  1. analytical Jacobian

  2. state transformation matrices and sparse mat-mat methods

  3. several examples of Gesat Continuation using the Jacobian, transformations, and SpatialOps dense linear algebra outside of ExprLib time integration

  4. test of production rates computed in the analytical Jacobian vs cantera

  5. state transformation test added

  6. writeup of the derivation and calculation strategy

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